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@HySonLab

HySonLab

This is Prof. Truong-Son Hy's research group. We work on AI for Science, Bioinformatics, Drug Discovery, Drug Repurposing, and Medical AI.

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  1. ViDeBERTa ViDeBERTa Public

    ViDeBERTa: A powerful pre-trained language model for Vietnamese, EACL 2023

    Jupyter Notebook 57 11

  2. Directed_Evolution Directed_Evolution Public

    Protein Design by Machine Learning guided Directed Evolution

    Python 50 6

  3. Protein_Redesign Protein_Redesign Public

    ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models

    Python 40 8

  4. LatentDE LatentDE Public

    LatentDE: Latent-based Directed Evolution for Protein Sequence Design

    Python 39 2

  5. BioMedKG BioMedKG Public

    Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs

    Python 34 6

  6. Ligand_Generation Ligand_Generation Public

    Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning

    Python 33 5

Repositories

Showing 10 of 50 repositories
  • BioAgent-FEV Public

    A structured evidence map and FEV framework for evaluating functionality, evidence, replayability, and validation in agentic bioinformatics

    HySonLab/BioAgent-FEV's past year of commit activity
    Python 2 MIT 0 0 0 Updated Nov 4, 2026
  • GraphPathology Public

    GraphPathology enables geometry-aware reconstruction of spatial transcriptomics from sparse molecular measurements

    HySonLab/GraphPathology's past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 2, 2026
  • EvoSynth Public

    EvoSynth: Enabling Multi-Target Drug Discovery through Latent Evolutionary Optimization and Synthesis-Aware Prioritization

    HySonLab/EvoSynth's past year of commit activity
    Jupyter Notebook 9 MIT 0 0 0 Updated Oct 30, 2026
  • PRIME-ISP Public

    Towards a Unified Framework for Protein Interaction Site Prediction Using Hierarchical Protein Representations

    HySonLab/PRIME-ISP's past year of commit activity
    Python 3 MIT 0 0 0 Updated Oct 30, 2026
  • MutaStruct Public

    MUTASTRUCT: Revisiting Benchmarks for Single-Site Mutation-Induced Structural Change Prediction

    HySonLab/MutaStruct's past year of commit activity
    Python 2 0 0 0 Updated Oct 23, 2026
  • amp-atlas Public

    Browser-only antimicrobial peptide research workspace: published data, molecular visualization, descriptors, and sequence/structure neighbors.

    HySonLab/amp-atlas's past year of commit activity
    Python 2 MIT 0 1 0 Updated Oct 22, 2026
  • PRIME Public

    PRIME: Protein Representation via Physics-Informed Multiscale Equivariant Hierarchies

    HySonLab/PRIME's past year of commit activity
    Python 3 MIT 1 0 0 Updated Oct 6, 2026
  • AgentIoT Public

    HAMA: A Hierarchical Adaptive Multi-Agent Architecture for Industrial IoT Predictive Maintenance

    HySonLab/AgentIoT's past year of commit activity
    Python 6 MIT 4 0 0 Updated Sep 4, 2026
  • MatCPP Public

    Efficient Matheuristics for Solving the Chinese Postman Problem with Load Constraints

    HySonLab/MatCPP's past year of commit activity
    C++ 1 0 0 0 Updated Jul 28, 2026
  • LINKER Public

    LINKER: Learning Interactions Between Functional Groups and Residues With Chemical Knowledge-Enhanced Reasoning and Explainability

    HySonLab/LINKER's past year of commit activity
    Jupyter Notebook 10 1 0 0 Updated Jul 16, 2026
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