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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 178 43

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 123 49

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 115 14

  4. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    SCSS 45 45

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 43 5

  6. Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Public

    Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022

    Python 42 8

Repositories

Showing 10 of 683 repositories
  • tfcb_2026 Public

    MCB 536: Tools for Computational Biology (2026)

    FredHutch/tfcb_2026's past year of commit activity
    Jupyter Notebook 7 16 0 1 Updated Nov 6, 2026
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki's past year of commit activity
    SCSS 45 45 43 9 Updated Nov 5, 2026
  • ocdo Public

    Home of the OCDO public website

    FredHutch/ocdo's past year of commit activity
    HTML 0 2 3 3 Updated Nov 5, 2026
  • anvil_surveys Public

    Repository for surveydown files for various AnVIL surveys (e.g., SOTA iterations)

    FredHutch/anvil_surveys's past year of commit activity
    HTML 0 MIT 0 0 1 Updated Nov 5, 2026
  • ood_rstudio_server Public Forked from mcw-rcc/bc_rcc_rstudio_server

    RStudio Server app for Open OnDemand

    FredHutch/ood_rstudio_server's past year of commit activity
    Shell 0 MIT 11 0 0 Updated Nov 4, 2026
  • ood_rstudio_server_apptainer Public Forked from FredHutch/ood_rstudio_server

    RStudio Server app for Open OnDemand w/Apptainer

    FredHutch/ood_rstudio_server_apptainer's past year of commit activity
    HTML 0 MIT 11 2 0 Updated Nov 4, 2026
  • DPR2 Public

    DPR2 - DataPackageR2

    FredHutch/DPR2's past year of commit activity
    R 2 0 5 2 Updated Nov 4, 2026
  • VISCtemplates Public

    Tools for creating polished and reproducible reports at VISC

    FredHutch/VISCtemplates's past year of commit activity
    R 11 1 26 5 Updated Nov 2, 2026
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests's past year of commit activity
    Python 1 MIT 1 21 1 Updated Nov 1, 2026
  • codex-perplexity-adapter Public

    Local Responses API adapter for using Codex with the Perplexity Agent API

    FredHutch/codex-perplexity-adapter's past year of commit activity
    Python 2 MIT 0 0 4 Updated Oct 30, 2026